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Sannin by MehPhisto
Follow Legendary Shinobis through life as they are never what they appear to be.
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Sealed by Sharingank
Series of NaruSaku request drabbles. Possible current manga spoilers.
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Secrets In The Dark by Sharingank
She always wondered why he wore that nail polish...slight ItaSaku oneshot.

Serendipity by Refused!
A familiar ninja, now on his own & haunted by old memories. As fate would have it, he bumps into old friends, now his enemies. NaruSaku.
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Set in Stone by The SOC Puppet
AU. When the Leaf Village abandoned Naruto to die as a baby, the last thing they expected was for him to come back as a shinobi – and perhaps an enemy.
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Shadow Claw by Saraki22
Naruto is reported dead after the fight with Zabuza and Haku, but is actually taken in by a mysterious being in order to revive a lost fighting style.
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Shatter by DemonicNargles
If you crack it, you can fix it. If you lose it, you can find it. But Naruto's mind shattered into a million pieces, and no one could hope to put it back together again. Naruto/Sakura NaruSaku. Dark. One-shot.
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Shatter by Sharingank
There are memories that can bind and memories that can break...Even though the pain of loss will always be there, the power of the will can overcome it...NaruxSaku oneshot.

Shattered by Morgri
After an incident, the pain, the loneliness, the deceit, the hopelessness, shattered Naruto. Now he only thinks of others happiness, and what better way to make them happy, but to rid them of himself?
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Shift by Kirek
A (hopefully) humorous approach on the Self-insertion business. Follow me as I experience chaos in Narutoverse. (this is a parody solely meant for a bundle of laughs) Me x Tsunade (whoohoo! can you see my broad grin already?)
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Shifting Sands by Big Azn Daddy
AU Naruto must be abandoned by the Leaf in order to protect it but when others get a hold of this Demon will Naruto be the end of the Leaf or will he save the crumbling world?.
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Shining by Zero0000
The Valley of the End is a place where two of the greatest battles of shinobi history was fought. However, this story may very well be an utterly warped version of the second one.

Silence by Alden
There is a room in Ino's house that is perfectly silent...

Single Ninja On The Town! by Arkhe
“The Single Male Shinobi Guide to woo the Kunoichi of their Dreams.” Naruto read the title out aloud. “Hmm...” .:Additional summary within:. [COMPLETE!]
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Sleeper by Sharingank
It was a song that led Shikamaru to the riverbed, and it is a kiss that will change everything he thought he knew...ShikaIno...COMPLETE! Yay!
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Slipshod by Sharingank
Life...death...two sides of the same coin. Every living being cannot escape the inevitable...but that does not mean one cannot change one's destiny before the end...NaruSaku centric...MANGA SPOILERS [Ch. 261 and up]
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Sofa by Ellonen
As Naruto struggles with his own humanity, Sakura comes to be the only one he can rely on. On a simple sofa, they embrace each other as the world collapses around them. Completed on the 5th of June, 05.
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Some Promises Can Be Broken by Saraki22
Revenge is harder then most people know, it becomes even harder when the target becomes a friend.
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Someone Who Understands by Zero0000
Living your life as the vessel for a ten thousand year old fox demon is never easy. But what if someone else understood exactly what it was like? VOTING ENDED! NaruOC
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Sound Of The Wind by TokehGecko
A Naruto AU Fanfic; Naruto as one of Orochimaru's elite guards. Starts at the Retrieve Sasuke Arc. NaruxTayu
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Spiral Unwinding by Pridefall
[AU] What do demons, blood cults, jaded ghosts, and the shadowy politics of seven nations have to do with Jiraiya's death? Naruto has no idea, but he's sure as hell going to find out. Even if the truth has a chance of driving him insane...
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Split by DemonicNargles
His fractured mind made him capable of anything. It made him Konoha’s most unpredictable ninja. And eventually, Konoha’s most unpredictable ninjas. If it sounds strange, it’s because it is. One-shot.

Split Existence by TokehGecko
Naruto and Kyuubi. Forced to protect each other as they are forced into a situation where they are twin brothers. If one dies, the other dies...
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Splitting The Lightning by Pridefall
[Timeskip] As war between the Leaf and the Rock looms over the horizon, Hatake Kakashi is going to have to learn that, in a world where words and titles mean everything, one must put up or shut up in the face of the impossible.
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State of Mind: 01 by Sidelabel
Ever wondered what is inside the mind of Eva Unit 01? This is his story, his feelings, his struggles, his everything..

Stealth by Alden
Ino, feeling the need to become stronger, does something not completely legal... (Really old oneshot from a challenge...)

Strange Days by TokehGecko
A Strange Clan launching a War to all Villages. SakuNaru, NaruSaku. A few Character Deaths.

Strength of Fist and Heart by Darklion74
Misplaced anger forces Naruto as a toddler from town into the hands of... someone who has abandoned the leaf for a long time. The REAL Exam begins in Chapter 9!
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Struck Silver by Sidelabel
The bigger the person the bigger the fall. Naruto falls victim to something which could end his career as a ninja: a disease. It's new, it's dangerous, and it spells the end for Naruto.

Sudden Reinforcement by MehPhisto
Main chars are Nara Shikamaru, Uzumaki Naruto and Haruno Sakura. What if an ANBU joined them on a mission to retrieve Sasuke? AU
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Suffer by DemonicNargles
Naruto had always been a cheerful, laid-back kinda guy. But there are some things he can never forgive. “Killing you would be too kind. I want you to suffer.” Dark. Rated M for a bit of gore. One-shot.

Sunflower Flowergirl by Pridefall
Sometimes, it just works. [Blatant sexual!fluff.] [InoXNaru][NaruXIno]